Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | EC382_RS00140 | Not Available | Positive | 37012 - 37887 | 31866.6 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | EC382_RS00145 | Not Available | Positive | 37911 - 38201 | 11255.4 |
| trans-aconitate 2-methyltransferase | EC382_RS00150 | Not Available | Positive | 38258 - 39016 | 28987.4 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 39267 - 39363 | Not Available |
| bestrophin family inner membrane protein | EC382_RS00155 | Not Available | Negative | 39020 - 39934 | 34811.0 |
| tagaturonate reductase | EC382_RS00160 | Not Available | Negative | 40131 - 41582 | 54811.3 |
| diguanylate cyclase | EC382_RS00165 | Not Available | Negative | 41809 - 43227 | 52170.5 |
| duf4186 domain-containing protein | EC382_RS00170 | Not Available | Negative | 43366 - 43725 | 13544.5 |
| glutaminase b | EC382_RS00175 | Not Available | Negative | 43725 - 44651 | 33517.6 |
| succinate-semialdehyde dehydrogenase | EC382_RS00180 | Not Available | Negative | 44715 - 46103 | 49732.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





