Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | EC382_RS18615 | Not Available | Positive | 3922845 - 3923741 | 33239.9 |
| bifunctional alpha/beta hydrolase/class i sam-dependent methyltransferase | EC382_RS18620 | Not Available | Positive | 3923757 - 3925514 | 65407.3 |
| phosphatase pap2/dual specificity phosphatase family protein | EC382_RS18625 | Not Available | Positive | 3925504 - 3926820 | 50687.8 |
| fmn-dependent nadh-azoreductase | EC382_RS18630 | Not Available | Negative | 3926874 - 3927479 | 21642.9 |
| atp-dependent rna helicase hrpa | EC382_RS18635 | Not Available | Positive | 3927680 - 3931582 | 148969.0 |
| ydcf family protein | EC382_RS18640 | Not Available | Positive | 3931854 - 3932654 | 29764.5 |
| aldehyde dehydrogenase | EC382_RS18645 | Not Available | Positive | 3932851 - 3934290 | 52204.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EC382_RS18650 | Not Available | Negative | 3934332 - 3935333 | 35749.7 |
| cytochrome b561 | EC382_RS18655 | Not Available | Positive | 3935522 - 3936052 | 20287.7 |
| hypothetical protein | EC382_RS18660 | Not Available | Positive | 3936297 - 3936470 | 5860.19 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





