Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | EC382_RS18340 | Not Available | Negative | 3840857 - 3842404 | 54615.4 |
| trna epoxyqueuosine(34) reductase queg | EC382_RS18345 | Not Available | Positive | 3842403 - 3843542 | 43045.4 |
| hypothetical protein | EC382_RS18350 | Not Available | Negative | 3843525 - 3843578 | 2056.38 |
| aida-i family autotransporter adhesin yfal/ehac | EC382_RS18355 | Not Available | Positive | 3843958 - 3847710 | 131305.0 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | EC382_RS18360 | Not Available | Negative | 3847851 - 3848573 | 26557.0 |
| dna topoisomerase (atp-hydrolyzing) subunit a | EC382_RS18365 | Not Available | Positive | 3848720 - 3851347 | 96987.3 |
| duf2138 domain-containing protein | EC382_RS18370 | Not Available | Positive | 3851496 - 3853184 | 62716.8 |
| duf1175 domain-containing protein | EC382_RS18375 | Not Available | Positive | 3853181 - 3853804 | 23767.5 |
| alpha-2-macroglobulin family protein | EC382_RS18380 | Not Available | Positive | 3853948 - 3858342 | 162600.0 |
| duf2300 domain-containing protein | EC382_RS18385 | Not Available | Positive | 3858343 - 3859992 | 61509.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





