Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | EC382_RS00090 | Not Available | Negative | 22413 - 23735 | 49320.8 |
| type ii toxin-antitoxin system antitoxin hipb | EC382_RS00095 | Not Available | Negative | 23735 - 24001 | 10033.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | EC382_RS00100 | Not Available | Negative | 24212 - 24979 | 28353.2 |
| autotransporter barrel domain-containing lipoprotein | EC382_RS00105 | Not Available | Negative | 24970 - 28998 | 138217.0 |
| autoinducer-2 kinase | EC382_RS00110 | Not Available | Negative | 29529 - 31121 | 57646.1 |
| transcriptional regulator lsrr | EC382_RS00115 | Not Available | Negative | 31200 - 32153 | 33800.0 |
| autoinducer 2 abc transporter atp-binding protein lsra | EC382_RS00120 | Not Available | Positive | 32402 - 33937 | 55846.8 |
| autoinducer 2 abc transporter permease lsrc | EC382_RS00125 | Not Available | Positive | 33931 - 34959 | 36435.1 |
| autoinducer 2 abc transporter permease lsrd | EC382_RS00130 | Not Available | Positive | 34959 - 35951 | 34430.5 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | EC382_RS00135 | Not Available | Positive | 35963 - 36985 | 36686.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





