Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isovaleryl-coa dehydrogenase | EC382_RS18240 | Not Available | Negative | 3820568 - 3822193 | 60638.5 |
| glutathionylspermidine synthase family protein | EC382_RS18245 | Not Available | Negative | 3822277 - 3823440 | 45050.0 |
| duf1190 domain-containing protein | EC382_RS18250 | Not Available | Negative | 3823443 - 3824081 | 23373.9 |
| duf350 domain-containing protein | EC382_RS18255 | Not Available | Negative | 3824091 - 3824489 | 14252.7 |
| yjfk family protein | EC382_RS18260 | Not Available | Negative | 3824507 - 3825166 | 25040.4 |
| pspa/im30 family protein | EC382_RS18265 | Not Available | Negative | 3825217 - 3825915 | 25335.0 |
| duf2170 family protein | EC382_RS18270 | Not Available | Negative | 3825934 - 3826335 | 14891.8 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | EC382_RS18275 | Not Available | Negative | 3826462 - 3827193 | 26558.3 |
| ribonuclease r | EC382_RS18280 | Not Available | Negative | 3827374 - 3829815 | 92124.5 |
| nitric oxide-sensing transcriptional repressor nsrr | EC382_RS18285 | Not Available | Negative | 3829854 - 3830279 | 15594.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





