Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macrodomain ori organization protein maop | EC382_RS18135 | Not Available | Negative | 3807013 - 3807351 | 13134.2 |
| hth-type transcriptional regulator hdfr | EC382_RS18140 | Not Available | Positive | 3807470 - 3808309 | 31778.0 |
| Trna-trp | Not Available | Not Available | Positive | 3808405 - 3808480 | Not Available |
| duf2686 family protein | EC382_RS18155 | Not Available | Positive | 3809047 - 3809841 | 29738.1 |
| 50s ribosomal protein l9 | EC382_RS18160 | Not Available | Negative | 3809912 - 3810361 | 15770.0 |
| 30s ribosomal protein s18 | EC382_RS18165 | Not Available | Negative | 3810403 - 3810630 | 8986.94 |
| primosomal replication protein n | EC382_RS18170 | Not Available | Negative | 3810635 - 3810949 | 11472.9 |
| 30s ribosomal protein s6 | EC382_RS18175 | Not Available | Negative | 3810956 - 3811351 | 15187.9 |
| duf1471 domain-containing protein | EC382_RS18180 | Not Available | Positive | 3811678 - 3811953 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase ulaf | EC382_RS18185 | Not Available | Negative | 3812082 - 3812768 | 25279.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





