Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | EC382_RS18085 | Not Available | Negative | 3795990 - 3797465 | 54072.2 |
| hth-type transcriptional activator ilvy | EC382_RS18090 | Not Available | Positive | 3797615 - 3798508 | 33220.3 |
| threonine ammonia-lyase, biosynthetic | EC382_RS18095 | Not Available | Negative | 3798560 - 3800104 | 56187.4 |
| dihydroxy-acid dehydratase | EC382_RS18100 | Not Available | Negative | 3800107 - 3801957 | 65549.4 |
| branched-chain-amino-acid transaminase | EC382_RS18105 | Not Available | Negative | 3802022 - 3802951 | 34095.6 |
| acetolactate synthase 2 small subunit | EC382_RS18110 | Not Available | Negative | 3802971 - 3803234 | 9703.74 |
| acetolactate synthase 2 catalytic subunit | EC382_RS18115 | Not Available | Negative | 3803231 - 3804877 | 59117.1 |
| hypothetical protein | EC382_RS18120 | Not Available | Negative | 3804880 - 3804930 | 1910.25 |
| ilv operon leader peptide | EC382_RS18125 | Not Available | Negative | 3805017 - 3805115 | 3231.32 |
| yifb family mg chelatase-like aaa atpase | EC382_RS18130 | Not Available | Positive | 3805468 - 3806988 | 55262.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





