Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | EC382_RS17985 | Not Available | Negative | 3774785 - 3775525 | 27963.8 |
| o-antigen assembly polymerase | EC382_RS17990 | Not Available | Negative | 3775528 - 3776880 | 51506.1 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | EC382_RS17995 | Not Available | Negative | 3776877 - 3777956 | 40647.8 |
| lipid iii flippase wzxe | EC382_RS18000 | Not Available | Negative | 3777953 - 3779203 | 44962.3 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | EC382_RS18005 | Not Available | Negative | 3779205 - 3780335 | 41922.4 |
| dtdp-fucosamine acetyltransferase | EC382_RS18010 | Not Available | Negative | 3780340 - 3781014 | 24221.7 |
| glucose-1-phosphate thymidylyltransferase rfba | EC382_RS18015 | Not Available | Negative | 3780992 - 3781873 | 32736.3 |
| dtdp-glucose 4,6-dehydratase | EC382_RS18020 | Not Available | Negative | 3781892 - 3782959 | 39775.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | EC382_RS18025 | Not Available | Negative | 3782959 - 3784221 | 45841.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | EC382_RS18030 | Not Available | Negative | 3784218 - 3785348 | 42250.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





