Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| common pilus major fimbrillin subunit ecpa | EC382_RS17825 | Not Available | Negative | 3746184 - 3746771 | 20126.6 |
| ecp biosynthesis operon dna-binding transcriptional regulator ecpr | EC382_RS17830 | Not Available | Negative | 3746846 - 3747388 | 21246.7 |
| hypothetical protein | EC382_RS17835 | Not Available | Positive | 3748213 - 3748404 | 7297.65 |
| 50s ribosomal protein l36 | EC382_RS17840 | Not Available | Negative | 3748474 - 3748614 | 5466.94 |
| type b 50s ribosomal protein l31 | EC382_RS17845 | Not Available | Negative | 3748614 - 3748877 | 9920.71 |
| hypothetical protein | EC382_RS17850 | Not Available | Negative | 3749241 - 3749342 | 3999.01 |
| nadh-dependent flavin oxidoreductase | EC382_RS17855 | Not Available | Negative | 3749816 - 3750958 | 41827.1 |
| alpha/beta hydrolase | EC382_RS17860 | Not Available | Negative | 3751193 - 3752113 | 33267.6 |
| lysr family transcriptional regulator | EC382_RS17865 | Not Available | Positive | 3752270 - 3753196 | 34360.5 |
| lysr family transcriptional regulator | EC382_RS17870 | Not Available | Positive | 3753397 - 3754290 | 33215.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





