Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid stress response transcriptional regulator ydeo | EC382_RS00040 | Not Available | Negative | 11185 - 11946 | 28856.0 |
| two-component system connector safa | EC382_RS00045 | Not Available | Negative | 12020 - 12217 | 7328.15 |
| acid resistance putative oxidoreductase ydep | EC382_RS00050 | Not Available | Negative | 12465 - 14744 | 83480.8 |
| fimbrial protein | EC382_RS00055 | Not Available | Negative | 15078 - 15992 | 32027.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 16045 - 16176 | Not Available |
| type 1 fimbrial protein | EC382_RS00060 | Not Available | Negative | 16052 - 16555 | 18147.4 |
| type 1 fimbrial protein | EC382_RS00065 | Not Available | Negative | 16568 - 17098 | 18921.6 |
| fimbrial biogenesis outer membrane usher protein | EC382_RS00070 | Not Available | Negative | 17112 - 19763 | 96840.5 |
| fimbria/pilus periplasmic chaperone | EC382_RS00075 | Not Available | Negative | 19805 - 20515 | 26165.8 |
| fimbrial protein | EC382_RS00080 | Not Available | Negative | 20876 - 21439 | 19145.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





