Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | EC382_RS17725 | Not Available | Positive | 3724461 - 3724733 | 10469.6 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | EC382_RS17730 | Not Available | Positive | 3724960 - 3725256 | 11468.6 |
| type v toxin-antitoxin system toxin ghot | EC382_RS17735 | Not Available | Positive | 3725284 - 3725457 | 6555.44 |
| lysine--trna ligase | EC382_RS17740 | Not Available | Negative | 3725576 - 3727093 | 57887.9 |
| dipeptide/tripeptide permease dtpc | EC382_RS17745 | Not Available | Negative | 3727330 - 3728787 | 53043.7 |
| lysine decarboxylase cada | EC382_RS17750 | Not Available | Negative | 3728846 - 3730993 | 81264.7 |
| cadaverine/lysine antiporter | EC382_RS17755 | Not Available | Negative | 3731073 - 3732407 | 46667.8 |
| dna-binding transcriptional activator cadc | EC382_RS17760 | Not Available | Negative | 3732772 - 3734310 | 57830.1 |
| duf4942 domain-containing protein | EC382_RS17765 | Not Available | Negative | 3735121 - 3735963 | 32313.9 |
| duf957 domain-containing protein | EC382_RS17770 | Not Available | Negative | 3736048 - 3736245 | 7519.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





