Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EC382_RS17375 | Not Available | Negative | 3645777 - 3647075 | 46895.0 |
| glucuronate isomerase | EC382_RS17380 | Not Available | Positive | 3647558 - 3648970 | 53990.1 |
| altronate dehydratase | EC382_RS17385 | Not Available | Positive | 3648985 - 3650472 | 54140.3 |
| ygjv family protein | EC382_RS17390 | Not Available | Positive | 3650555 - 3651106 | 20566.7 |
| serine/threonine transporter sstt | EC382_RS17395 | Not Available | Negative | 3651110 - 3652354 | 43480.4 |
| terc family membrane protein alx | EC382_RS17400 | Not Available | Negative | 3652909 - 3653874 | 35983.1 |
| gfo/idh/moca family oxidoreductase | EC382_RS17405 | Not Available | Negative | 3654158 - 3655144 | 36247.2 |
| vancomycin high temperature exclusion protein | EC382_RS17410 | Not Available | Negative | 3655223 - 3655915 | 25631.5 |
| m48 family metallopeptidase | EC382_RS17415 | Not Available | Negative | 3655992 - 3656495 | 19456.6 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | EC382_RS17420 | Not Available | Positive | 3656580 - 3657716 | 42323.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





