Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionate kinase | EC382_RS17275 | Not Available | Positive | 3628640 - 3629848 | 43386.7 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | EC382_RS17280 | Not Available | Positive | 3629882 - 3632176 | 85982.4 |
| enamine/imine deaminase | EC382_RS17285 | Not Available | Positive | 3632190 - 3632579 | 14008.0 |
| l-serine ammonia-lyase | EC382_RS17290 | Not Available | Positive | 3632651 - 3634015 | 48538.6 |
| haaap family serine/threonine permease | EC382_RS17295 | Not Available | Positive | 3634290 - 3635621 | 48317.6 |
| serine dehydratase subunit alpha family protein | EC382_RS17300 | Not Available | Positive | 3635649 - 3636959 | 45332.9 |
| hypothetical protein | EC382_RS17305 | Not Available | Negative | 3637093 - 3637257 | 5935.07 |
| pirin family protein | EC382_RS17310 | Not Available | Negative | 3637280 - 3637981 | 25966.1 |
| lysr family transcriptional regulator | EC382_RS17315 | Not Available | Positive | 3638086 - 3638982 | 33258.3 |
| duf805 domain-containing protein | EC382_RS17320 | Not Available | Negative | 3639033 - 3639389 | 13456.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





