Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase adp-binding subunit dhal | EC382_RS17070 | Not Available | Positive | 3589252 - 3589884 | 22632.1 |
| dihydroxyacetone kinase subunit dham | EC382_RS17075 | Not Available | Positive | 3589895 - 3591313 | 51458.5 |
| alpha,alpha-trehalase | EC382_RS17080 | Not Available | Positive | 3591633 - 3593330 | 63783.2 |
| iron abc transporter substrate-binding protein | EC382_RS17090 | Not Available | Positive | 3593661 - 3594683 | 37742.4 |
| iron abc transporter permease | EC382_RS17095 | Not Available | Positive | 3594683 - 3595663 | 34765.1 |
| abc transporter atp-binding protein | EC382_RS17100 | Not Available | Positive | 3595660 - 3596418 | 27403.7 |
| methyltransferase domain-containing protein | EC382_RS17105 | Not Available | Positive | 3596428 - 3597240 | 30919.4 |
| modd protein | EC382_RS17110 | Not Available | Positive | 3597237 - 3598091 | 30554.8 |
| tonb-dependent receptor | EC382_RS17115 | Not Available | Positive | 3598117 - 3600087 | 73491.0 |
| glsb/yeaq/ymge family stress response membrane protein | EC382_RS17120 | Not Available | Negative | 3600137 - 3600391 | 8703.27 |
Pathways
514 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





