Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein tripeptide amidase mpaa | EC382_RS16765 | Not Available | Positive | 3541697 - 3542425 | 26559.4 |
| l-ala-d/l-glu epimerase | EC382_RS16770 | Not Available | Negative | 3542400 - 3543365 | 34706.0 |
| thiol peroxidase | EC382_RS16775 | Not Available | Positive | 3543484 - 3543990 | 17836.3 |
| transcriptional regulator tyrr | EC382_RS16780 | Not Available | Negative | 3544034 - 3545575 | 57657.5 |
| tigr01620 family protein | EC382_RS16785 | Not Available | Negative | 3545723 - 3546600 | 32437.5 |
| dna polymerase iii subunit psi | EC382_RS17045 | Not Available | Negative | 3583053 - 3583466 | 15208.3 |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | EC382_RS17050 | Not Available | Positive | 3583569 - 3584600 | 37626.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | EC382_RS17055 | Not Available | Positive | 3584865 - 3585924 | 38597.8 |
| pts-dependent dihydroxyacetone kinase operon transcriptional regulator dhar | EC382_RS17060 | Not Available | Negative | 3586024 - 3587952 | 70991.5 |
| dihydroxyacetone kinase subunit dhak | EC382_RS17065 | Not Available | Positive | 3588171 - 3589241 | 38200.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





