Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspf | EC382_RS16665 | Not Available | Positive | 3519393 - 3519827 | 15959.4 |
| trna 2-thiocytidine(32) synthetase ttca | EC382_RS16670 | Not Available | Positive | 3520003 - 3520938 | 35461.8 |
| atp-dependent rna helicase dbpa | EC382_RS16675 | Not Available | Negative | 3521067 - 3522440 | 49238.8 |
| zinc transporter zntb | EC382_RS16680 | Not Available | Negative | 3522918 - 3523901 | 36614.3 |
| diguanylate cyclase dgcm | EC382_RS16685 | Not Available | Positive | 3524155 - 3525387 | 46511.9 |
| dna endonuclease smra | EC382_RS16690 | Not Available | Negative | 3525408 - 3525971 | 21513.7 |
| lysr family transcriptional regulator | EC382_RS16695 | Not Available | Negative | 3526301 - 3527209 | 34114.3 |
| m20 family metallo-hydrolase | EC382_RS16700 | Not Available | Positive | 3527385 - 3528695 | 46622.9 |
| amidohydrolase | EC382_RS16705 | Not Available | Positive | 3528695 - 3530140 | 52182.4 |
| p-aminobenzoyl-glutamate transporter | EC382_RS16710 | Not Available | Positive | 3530177 - 3531703 | 54890.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





