Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EC382_RS16565 | Not Available | Positive | 3498689 - 3499873 | 41730.0 |
| azlc family abc transporter permease | EC382_RS16570 | Not Available | Positive | 3499997 - 3500734 | 26099.1 |
| l-valine transporter subunit ygah | EC382_RS16575 | Not Available | Positive | 3500724 - 3501059 | 11996.2 |
| hypothetical protein | EC382_RS16580 | Not Available | Negative | 3501078 - 3501179 | 3678.61 |
| multidrug efflux transporter emrab transcriptional repressor emrr | EC382_RS16585 | Not Available | Positive | 3501150 - 3501680 | 20564.7 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | EC382_RS16590 | Not Available | Positive | 3501807 - 3502979 | 42754.6 |
| multidrug efflux mfs transporter permease subunit emrb | EC382_RS16595 | Not Available | Positive | 3502996 - 3504534 | 55627.7 |
| s-ribosylhomocysteine lyase | EC382_RS16600 | Not Available | Negative | 3504598 - 3505113 | 19417.3 |
| glutamate--cysteine ligase | EC382_RS16605 | Not Available | Negative | 3505263 - 3506819 | 58272.5 |
| deda family protein | EC382_RS16610 | Not Available | Negative | 3506892 - 3507320 | 15560.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





