Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf883 domain-containing protein | EC382_RS16515 | Not Available | Positive | 3488553 - 3488882 | 11847.9 |
| plp-dependent aminotransferase family protein | EC382_RS16520 | Not Available | Negative | 3489032 - 3490366 | 49747.8 |
| carboxymuconolactone decarboxylase family protein | EC382_RS16525 | Not Available | Positive | 3490454 - 3490885 | 16147.4 |
| glutaredoxin-like protein nrdh | EC382_RS16530 | Not Available | Positive | 3491094 - 3491339 | 9139.98 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | EC382_RS16535 | Not Available | Positive | 3491336 - 3491746 | 15341.3 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | EC382_RS16540 | Not Available | Positive | 3491719 - 3493863 | 80464.5 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | EC382_RS16545 | Not Available | Positive | 3493873 - 3494832 | 36485.1 |
| glycine betaine/l-proline abc transporter atp-binding protein prov | EC382_RS16550 | Not Available | Positive | 3495188 - 3496390 | 44165.5 |
| glycine betaine/l-proline abc transporter permease prow | EC382_RS16555 | Not Available | Positive | 3496383 - 3497447 | 37592.0 |
| proline/glycine betaine abc transporter substrate-binding protein prox | EC382_RS16560 | Not Available | Positive | 3497505 - 3498497 | 36024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





