Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-selenouridine(34) synthase mnmh | EC382_RS16415 | Not Available | Positive | 3466970 - 3468064 | 41087.2 |
| adhesin-like autotransporter ypja/ehad | EC382_RS16420 | Not Available | Negative | 3468203 - 3470957 | 93192.3 |
| atpase | EC382_RS16425 | Not Available | Negative | 3471022 - 3471141 | 4328.2 |
| recombinase family protein | EC382_RS16430 | Not Available | Negative | 3471296 - 3471514 | 8151.23 |
| hypothetical protein | EC382_RS16435 | Not Available | Negative | 3471892 - 3473241 | 50753.9 |
| Trna-met | Not Available | Not Available | Positive | 3473992 - 3474067 | Not Available |
| hypothetical protein | EC382_RS16445 | Not Available | Positive | 3474627 - 3476879 | 85275.2 |
| carbon starvation induced protein csid | EC382_RS16450 | Not Available | Positive | 3477214 - 3478191 | 37350.6 |
| l-2-hydroxyglutarate oxidase | EC382_RS16455 | Not Available | Positive | 3478210 - 3479478 | 46068.6 |
| nadp-dependent succinate-semialdehyde dehydrogenase | EC382_RS16460 | Not Available | Positive | 3479501 - 3480949 | 51793.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





