Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aspartate kinase/homoserine dehydrogenase ii | EC382_RS16210 | Not Available | Negative | 3420237 - 3422669 | 88923.8 |
| cystathionine gamma-synthase | EC382_RS16215 | Not Available | Negative | 3422672 - 3423832 | 41552.8 |
| met regulon transcriptional regulator metj | EC382_RS16220 | Not Available | Positive | 3424109 - 3424426 | 12141.4 |
| yiix family permuted papain-like enzyme | EC382_RS16225 | Not Available | Positive | 3424486 - 3425094 | 23143.9 |
| phage adsorption protein nrfb | EC382_RS16235 | Not Available | Positive | 3426459 - 3428696 | 85354.3 |
| bacteriophage adsorption protein nfra | EC382_RS16240 | Not Available | Positive | 3428683 - 3431655 | 111386.0 |
| duf4434 family protein | EC382_RS16245 | Not Available | Positive | 3431656 - 3432546 | 33131.7 |
| arac family transcriptional regulator | EC382_RS16250 | Not Available | Positive | 3432729 - 3433490 | 28992.5 |
| Trna-arg | Not Available | Not Available | Positive | 3433536 - 3433612 | Not Available |
| fimbria biosynthesis transcriptional regulator fimz | EC382_RS16260 | Not Available | Positive | 3433855 - 3434487 | 23678.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





