Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC382_RS16060 | Not Available | Negative | 3382794 - 3383219 | 16243.5 |
| glutamate racemase | EC382_RS16065 | Not Available | Negative | 3383674 - 3384531 | 31075.8 |
| tonb-dependent vitamin b12 receptor btub | EC382_RS16070 | Not Available | Negative | 3384476 - 3386359 | 69629.4 |
| trna (uridine(54)-c5)-methyltransferase trma | EC382_RS16075 | Not Available | Positive | 3386728 - 3387828 | 41941.3 |
| yijd family membrane protein | EC382_RS16080 | Not Available | Negative | 3387868 - 3388227 | 13024.3 |
| hth-type transcriptional repressor fabr | EC382_RS16085 | Not Available | Negative | 3388227 - 3388877 | 24536.5 |
| mfs transporter | EC382_RS16090 | Not Available | Negative | 3388981 - 3390297 | 47005.4 |
| amidohydrolase | EC382_RS16095 | Not Available | Negative | 3390340 - 3391506 | 42207.6 |
| si-specific nad(p)(+) transhydrogenase | EC382_RS16100 | Not Available | Positive | 3391836 - 3393236 | 51563.4 |
| dna-binding transcriptional regulator oxyr | EC382_RS16105 | Not Available | Negative | 3393219 - 3394136 | 34278.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





