Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pyrophosphohydrolase | EC382_RS15960 | Not Available | Negative | 3361305 - 3361835 | 20796.0 |
| dna mismatch repair endonuclease muth | EC382_RS15965 | Not Available | Positive | 3362520 - 3363209 | 25500.9 |
| terc family protein | EC382_RS15970 | Not Available | Positive | 3363278 - 3363991 | 26159.0 |
| lipoprotein ygdr | EC382_RS15975 | Not Available | Positive | 3364129 - 3364347 | 7877.35 |
| nadp(h)-dependent aldo-keto reductase | EC382_RS15980 | Not Available | Positive | 3364455 - 3365495 | 38501.7 |
| lysophospholipid transporter lplt | EC382_RS15985 | Not Available | Negative | 3365527 - 3366720 | 41573.0 |
| bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-acp synthetase | EC382_RS15990 | Not Available | Negative | 3366713 - 3368872 | 80758.8 |
| hth-type transcriptional regulator galr | EC382_RS15995 | Not Available | Positive | 3369458 - 3370489 | 37122.3 |
| diaminopimelate decarboxylase | EC382_RS16000 | Not Available | Negative | 3370496 - 3371758 | 46136.0 |
| dna-binding transcriptional regulator lysr | EC382_RS16005 | Not Available | Positive | 3371880 - 3372815 | 34424.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





