Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | EC382_RS15605 | Not Available | Positive | 3270758 - 3271180 | 15198.3 |
| aldose 1-epimerase | EC382_RS15610 | Not Available | Negative | 3271228 - 3272100 | 32707.1 |
| alcohol dehydrogenase catalytic domain-containing protein | EC382_RS15615 | Not Available | Negative | 3272112 - 3273206 | 39368.8 |
| abc transporter permease | EC382_RS15620 | Not Available | Negative | 3273239 - 3274237 | 34517.7 |
| sugar abc transporter atp-binding protein | EC382_RS15625 | Not Available | Negative | 3274261 - 3275772 | 55016.8 |
| sugar abc transporter substrate-binding protein | EC382_RS15630 | Not Available | Negative | 3275795 - 3276778 | 35135.3 |
| duf5107 domain-containing protein | EC382_RS15635 | Not Available | Negative | 3276875 - 3280156 | 123838.0 |
| rok family protein | EC382_RS15640 | Not Available | Positive | 3280274 - 3281467 | 44569.3 |
| serine hydroxymethyltransferase | EC382_RS15645 | Not Available | Negative | 3281530 - 3282783 | 45319.2 |
| no-inducible flavohemoprotein | EC382_RS15650 | Not Available | Positive | 3283111 - 3284301 | 43840.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





