Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase pepb | EC382_RS15505 | Not Available | Negative | 3252787 - 3254070 | 46194.6 |
| fe-s cluster assembly protein iscx | EC382_RS15510 | Not Available | Negative | 3254129 - 3254329 | 7731.92 |
| isc system 2fe-2s type ferredoxin | EC382_RS15515 | Not Available | Negative | 3254341 - 3254676 | 12345.5 |
| fe-s protein assembly chaperone hsca | EC382_RS15520 | Not Available | Negative | 3254678 - 3256528 | 65656.3 |
| co-chaperone hscb | EC382_RS15525 | Not Available | Negative | 3256545 - 3257060 | 20138.8 |
| iron-sulfur cluster assembly protein isca | EC382_RS15530 | Not Available | Negative | 3257156 - 3257479 | 11556.7 |
| fe-s cluster assembly scaffold iscu | EC382_RS15535 | Not Available | Negative | 3257496 - 3257882 | 13849.3 |
| cysteine desulfurase | EC382_RS15540 | Not Available | Negative | 3257910 - 3259124 | 45092.2 |
| fe-s cluster assembly transcriptional regulator iscr | EC382_RS15545 | Not Available | Negative | 3259236 - 3259724 | 17337.6 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | EC382_RS15550 | Not Available | Negative | 3259995 - 3260735 | 27049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





