Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | EC382_RS15355 | Not Available | Negative | 3216051 - 3217826 | 64980.3 |
| l-fucose-proton symporter | EC382_RS15360 | Not Available | Negative | 3217859 - 3219175 | 47547.6 |
| l-fuculose-phosphate aldolase | EC382_RS15365 | Not Available | Positive | 3219722 - 3220369 | 23790.7 |
| lactaldehyde reductase | EC382_RS15370 | Not Available | Positive | 3220397 - 3221545 | 40531.8 |
| flap endonuclease xni | EC382_RS15375 | Not Available | Negative | 3221600 - 3222445 | 31517.0 |
| l-serine ammonia-lyase ii | EC382_RS15380 | Not Available | Negative | 3222467 - 3223834 | 48725.8 |
| haaap family serine/threonine permease | EC382_RS15385 | Not Available | Negative | 3223892 - 3225181 | 46909.2 |
| nucleotide 5'-monophosphate nucleosidase | EC382_RS15390 | Not Available | Negative | 3225738 - 3227102 | 50955.9 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EC382_RS15395 | Not Available | Negative | 3227214 - 3228062 | 32522.1 |
| secy-interacting protein | EC382_RS15400 | Not Available | Positive | 3228130 - 3228675 | 20709.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





