Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC382_RS15255 | Not Available | Negative | 3197244 - 3197411 | 6312.14 |
| ymia family putative membrane protein | EC382_RS15260 | Not Available | Negative | 3197414 - 3197578 | 6232.76 |
| hth-type transcriptional regulator cysb | EC382_RS15265 | Not Available | Negative | 3197873 - 3198847 | 36152.5 |
| type i dna topoisomerase | EC382_RS15270 | Not Available | Negative | 3199057 - 3201654 | 97365.0 |
| ycin family protein | EC382_RS15275 | Not Available | Positive | 3202034 - 3202285 | 9386.17 |
| protease sohb | EC382_RS15280 | Not Available | Negative | 3202321 - 3203370 | 39368.7 |
| ycik family oxidoreductase | EC382_RS15285 | Not Available | Positive | 3203590 - 3204348 | 27972.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EC382_RS15290 | Not Available | Positive | 3204345 - 3204935 | 22028.2 |
| 23s rrna pseudouridine(2605) synthase rlub | EC382_RS15295 | Not Available | Negative | 3204975 - 3205850 | 32713.4 |
| murein transglycosylase a | EC382_RS15300 | Not Available | Positive | 3206233 - 3207330 | 40412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





