Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4387 domain-containing protein | EC382_RS14750 | Not Available | Positive | 3081409 - 3081726 | 11912.4 |
| dicarboxylate/amino acid:cation symporter | EC382_RS14755 | Not Available | Positive | 3081887 - 3083167 | 45263.0 |
| class i fumarate hydratase | EC382_RS14760 | Not Available | Positive | 3083275 - 3084927 | 60076.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EC382_RS14765 | Not Available | Positive | 3084937 - 3085539 | 22373.7 |
| lysr family transcriptional regulator | EC382_RS14770 | Not Available | Negative | 3085573 - 3086478 | 34349.4 |
| succinate--coa ligase subunit alpha | EC382_RS14775 | Not Available | Negative | 3087144 - 3088013 | 29779.3 |
| adp-forming succinate--coa ligase subunit beta | EC382_RS14780 | Not Available | Negative | 3088013 - 3089179 | 41395.1 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | EC382_RS14785 | Not Available | Negative | 3089455 - 3090672 | 44014.0 |
| 2-oxoglutarate dehydrogenase e1 component | EC382_RS14790 | Not Available | Negative | 3090687 - 3093488 | 105068.0 |
| succinate dehydrogenase iron-sulfur subunit | EC382_RS14795 | Not Available | Negative | 3093789 - 3094505 | 26785.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





