Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbd | EC382_RS14550 | Not Available | Negative | 3049134 - 3049376 | 8812.72 |
| conjugal transfer protein trap | EC382_RS14555 | Not Available | Negative | 3049315 - 3049899 | 21793.5 |
| conjugal transfer protein trab | EC382_RS14560 | Not Available | Negative | 3049889 - 3051319 | 50247.6 |
| type-f conjugative transfer system secretin trak | EC382_RS14565 | Not Available | Negative | 3051319 - 3052047 | 25717.9 |
| type iv conjugative transfer system protein trae | EC382_RS14570 | Not Available | Negative | 3052034 - 3052600 | 21299.9 |
| type iv conjugative transfer system protein tral | EC382_RS14575 | Not Available | Negative | 3052622 - 3052933 | 11992.8 |
| type iv conjugative transfer system pilin traa | EC382_RS14580 | Not Available | Negative | 3052948 - 3053301 | 12465.9 |
| conjugal transfer relaxosome protein tray | EC382_RS14585 | Not Available | Negative | 3053336 - 3053563 | 8764.48 |
| conjugal transfer protein trbj | EC382_RS14590 | Not Available | Negative | 3053682 - 3054329 | 25170.9 |
| relaxosome protein tram | EC382_RS14595 | Not Available | Negative | 3054523 - 3054906 | 14570.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





