Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hybrid sensor histidine kinase - response regulator | EC382_RS18395 | Not Available | Positive | 3861048 - 3863897 | 106513.0 |
| transcriptional regulator rcsb | EC382_RS18400 | Not Available | Negative | 3864097 - 3864747 | 23672.0 |
| Putative bacteriophage integrase | EC382_RS18405 | Not Available | Negative | 3864792 - 3866081 | 48474.3 |
| Putative excisionase | EC382_RS18410 | Not Available | Negative | 3866115 - 3866369 | 9492.34 |
| Hypothetical protein | EC382_RS18415 | Not Available | Negative | 3866377 - 3866523 | 6102.48 |
| Hypothetical protein | EC382_RS18420 | Not Available | Negative | 3866544 - 3866786 | 9658.8 |
| hypothetical protein | EC382_RS18425 | Not Available | Negative | 3866779 - 3867681 | 34285.5 |
| Hypothetical protein | EC382_RS18430 | Not Available | Negative | 3867678 - 3867902 | 8393.16 |
| Hypothetical protein | EC382_RS18435 | Not Available | Negative | 3867919 - 3868281 | 13220.7 |
| Phage antirepressor protein | EC382_RS18440 | Not Available | Negative | 3868274 - 3869140 | 33681.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





