Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin chaperone traq | EC382_RS14445 | Not Available | Negative | 3034560 - 3034850 | 11458.1 |
| conjugal transfer protein trba | EC382_RS14450 | Not Available | Negative | 3035248 - 3035589 | 12456.7 |
| type-f conjugative transfer system pilin assembly protein traf | EC382_RS14455 | Not Available | Negative | 3035603 - 3036346 | 28050.7 |
| conjugal transfer protein trbe | EC382_RS14460 | Not Available | Negative | 3036339 - 3036596 | 9521.65 |
| type-f conjugative transfer system mating-pair stabilization protein tran | EC382_RS14465 | Not Available | Negative | 3036610 - 3038448 | 66397.7 |
| hypothetical protein | EC382_RS14470 | Not Available | Negative | 3038608 - 3038988 | 14475.7 |
| type-f conjugative transfer system pilin assembly protein trbc | EC382_RS14475 | Not Available | Negative | 3038985 - 3039623 | 23531.1 |
| hypothetical protein | EC382_RS14480 | Not Available | Negative | 3039852 - 3040184 | 12919.0 |
| hypothetical protein | EC382_RS14490 | Not Available | Negative | 3040371 - 3040748 | 14884.5 |
| hypothetical protein | EC382_RS14495 | Not Available | Negative | 3041546 - 3042088 | 20056.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





