Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer relaxase/helicase trai | EC382_RS14390 | Not Available | Negative | 3019154 - 3024424 | 191726.0 |
| type iv conjugative transfer system coupling protein trad | EC382_RS14395 | Not Available | Negative | 3024424 - 3026622 | 83269.5 |
| hypothetical protein | EC382_RS14400 | Not Available | Negative | 3026678 - 3027409 | 27610.8 |
| hypothetical protein | EC382_RS14405 | Not Available | Negative | 3027577 - 3027837 | 9940.78 |
| complement resistance protein trat | EC382_RS14410 | Not Available | Negative | 3027897 - 3028628 | 26041.3 |
| surface exclusion protein | EC382_RS14415 | Not Available | Negative | 3028660 - 3029163 | 19297.3 |
| conjugal transfer mating pair stabilization protein trag | EC382_RS14420 | Not Available | Negative | 3029179 - 3032022 | 103492.0 |
| conjugal transfer protein trah | EC382_RS14425 | Not Available | Negative | 3032019 - 3033392 | 50410.6 |
| f-type conjugal transfer protein trbf | EC382_RS14430 | Not Available | Negative | 3033379 - 3033804 | 17104.9 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | EC382_RS14440 | Not Available | Negative | 3034028 - 3034573 | 19912.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





