Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| scp2 domain-containing protein | EC382_RS14285 | Not Available | Negative | 2995346 - 2995870 | 19673.0 |
| u32 family peptidase | EC382_RS14290 | Not Available | Positive | 2996079 - 2997074 | 37051.2 |
| u32 family peptidase | EC382_RS14295 | Not Available | Positive | 2997083 - 2997961 | 32523.1 |
| luciferase-like monooxygenase | EC382_RS14300 | Not Available | Positive | 2998042 - 2999049 | 37131.5 |
| tryptophan permease | EC382_RS14305 | Not Available | Negative | 2999167 - 3000411 | 44335.2 |
| dead/deah family atp-dependent rna helicase | EC382_RS14310 | Not Available | Negative | 3000565 - 3002454 | 70580.6 |
| protein yrbn | EC382_RS14315 | Not Available | Negative | 3002447 - 3002527 | 2979.59 |
| lipoprotein nlpi | EC382_RS14320 | Not Available | Negative | 3002634 - 3003518 | 33622.5 |
| polyribonucleotide nucleotidyltransferase | EC382_RS14325 | Not Available | Negative | 3003627 - 3005762 | 77106.6 |
| 30s ribosomal protein s15 | EC382_RS14330 | Not Available | Negative | 3006009 - 3006278 | 10269.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





