Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagatose-bisphosphate aldolase subunit kbay | EC382_RS14185 | Not Available | Positive | 2977737 - 2978597 | 31295.4 |
| pts n-acetylgalactosamine transporter subunit iib | EC382_RS14190 | Not Available | Positive | 2978764 - 2979240 | 17609.3 |
| n-acetylgalactosamine permease iic component 1 | EC382_RS14195 | Not Available | Positive | 2979279 - 2980082 | 28646.5 |
| pts n-acetylgalactosamine transporter subunit iid | EC382_RS14200 | Not Available | Positive | 2980072 - 2980863 | 28976.1 |
| galactosamine-6-phosphate isomerase | EC382_RS14205 | Not Available | Positive | 2980864 - 2981619 | 27717.5 |
| type 1 fimbrial protein | EC382_RS14210 | Not Available | Positive | 2982020 - 2982604 | 20579.1 |
| molecular chaperone | EC382_RS14215 | Not Available | Positive | 2982684 - 2983379 | 25577.8 |
| fimbrial biogenesis outer membrane usher protein | EC382_RS14220 | Not Available | Positive | 2983408 - 2985924 | 93589.3 |
| fimbrial protein | EC382_RS14225 | Not Available | Positive | 2985935 - 2987026 | 38455.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EC382_RS14230 | Not Available | Negative | 2987069 - 2987929 | 31349.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





