Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin hoka | EC382_RS13980 | Not Available | Positive | 2935831 - 2935983 | 5912.47 |
| rna chaperone/antiterminator cspa | EC382_RS13985 | Not Available | Negative | 2936171 - 2936383 | 7403.66 |
| hth-type transcriptional regulator | EC382_RS13990 | Not Available | Negative | 2936664 - 2936954 | 11033.5 |
| duf3053 domain-containing protein | EC382_RS13995 | Not Available | Positive | 2937388 - 2938098 | 25664.5 |
| glyoxylate/hydroxypyruvate reductase ghrb | EC382_RS14000 | Not Available | Negative | 2938148 - 2939122 | 35427.6 |
| ompa family lipoprotein | EC382_RS14005 | Not Available | Negative | 2939226 - 2939885 | 22198.6 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | EC382_RS14010 | Not Available | Positive | 2940038 - 2942371 | 85857.4 |
| n-acetyltransferase | EC382_RS14015 | Not Available | Negative | 2942340 - 2942780 | 17149.8 |
| dna-3-methyladenine glycosylase i | EC382_RS14020 | Not Available | Negative | 2942777 - 2943340 | 21083.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | EC382_RS14025 | Not Available | Positive | 2943498 - 2944196 | 25935.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





