Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter atp-binding protein | EC382_RS13930 | Not Available | Negative | 2924095 - 2925636 | 56443.9 |
| d-xylose abc transporter substrate-binding protein | EC382_RS13935 | Not Available | Negative | 2925714 - 2926706 | 35722.1 |
| xylose isomerase | EC382_RS13940 | Not Available | Positive | 2927072 - 2928394 | 49721.7 |
| xylulokinase | EC382_RS13945 | Not Available | Positive | 2928466 - 2929920 | 52621.3 |
| hypothetical protein | EC382_RS13950 | Not Available | Positive | 2930089 - 2930430 | 12587.0 |
| yiab family inner membrane protein | EC382_RS13955 | Not Available | Positive | 2930476 - 2930913 | 16139.7 |
| acyltransferase | EC382_RS13960 | Not Available | Negative | 2930955 - 2931950 | 37602.1 |
| hypothetical protein | EC382_RS13965 | Not Available | Positive | 2932125 - 2932424 | 11324.8 |
| glycine--trna ligase subunit alpha | EC382_RS13970 | Not Available | Positive | 2932519 - 2933430 | 34718.2 |
| glycine--trna ligase subunit beta | EC382_RS13975 | Not Available | Positive | 2933440 - 2935509 | 76817.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





