Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | EC382_RS13725 | Not Available | Negative | 2877124 - 2879145 | 76230.6 |
| atp-dependent dethiobiotin synthetase biod | EC382_RS13730 | Not Available | Negative | 2879724 - 2880401 | 24062.7 |
| malonyl-acp o-methyltransferase bioc | EC382_RS13735 | Not Available | Negative | 2880394 - 2881149 | 28344.9 |
| 8-amino-7-oxononanoate synthase | EC382_RS13740 | Not Available | Negative | 2881136 - 2882290 | 41626.7 |
| biotin synthase biob | EC382_RS13745 | Not Available | Negative | 2882287 - 2883327 | 38650.3 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | EC382_RS13750 | Not Available | Positive | 2883414 - 2884703 | 47334.3 |
| kinase inhibitor | EC382_RS13755 | Not Available | Positive | 2884762 - 2885238 | 17072.0 |
| putative acyl-coa thioester hydrolase | EC382_RS13760 | Not Available | Positive | 2885390 - 2886673 | 45983.5 |
| hydratase | EC382_RS13765 | Not Available | Negative | 2886814 - 2889075 | 81463.1 |
| anion permease | EC382_RS13770 | Not Available | Negative | 2889258 - 2890691 | 51353.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





