Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | EC382_RS13470 | Not Available | Positive | 2828622 - 2829239 | 23399.9 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | EC382_RS13475 | Not Available | Negative | 2829541 - 2832216 | 96132.5 |
| naat family transporter yche | EC382_RS13480 | Not Available | Positive | 2832693 - 2833340 | 23472.7 |
| hypothetical protein | EC382_RS13485 | Not Available | Negative | 2833498 - 2833794 | 11309.6 |
| oligopeptide abc transporter substrate-binding protein oppa | EC382_RS13490 | Not Available | Positive | 2834078 - 2835709 | 60979.1 |
| oligopeptide abc transporter permease oppb | EC382_RS13495 | Not Available | Positive | 2835795 - 2836715 | 33445.3 |
| oligopeptide abc transporter permease oppc | EC382_RS13500 | Not Available | Positive | 2836730 - 2837638 | 33034.0 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppd | EC382_RS13505 | Not Available | Positive | 2837650 - 2838663 | 37167.7 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppf | EC382_RS13510 | Not Available | Positive | 2838660 - 2839664 | 37227.8 |
| yciu family protein | EC382_RS13515 | Not Available | Negative | 2839717 - 2840046 | 12687.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





