Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | EC382_RS13215 | Not Available | Negative | 2773163 - 2773600 | 15951.0 |
| virulence factor brkb family protein | EC382_RS13220 | Not Available | Negative | 2773597 - 2774469 | 32840.7 |
| glucose-1-phosphatase | EC382_RS13225 | Not Available | Negative | 2774463 - 2775062 | 22719.0 |
| aldose 1-epimerase | EC382_RS13230 | Not Available | Negative | 2775203 - 2776090 | 33014.2 |
| mhs family mfs transporter | EC382_RS13235 | Not Available | Negative | 2776080 - 2777429 | 49197.8 |
| mfs transporter | EC382_RS13240 | Not Available | Negative | 2777528 - 2778961 | 50825.9 |
| alcohol dehydrogenase catalytic domain-containing protein | EC382_RS13245 | Not Available | Negative | 2779031 - 2780041 | 35967.7 |
| aldolase | EC382_RS13250 | Not Available | Negative | 2780074 - 2780961 | 31725.6 |
| sulfolactaldehyde 3-reductase | EC382_RS13255 | Not Available | Negative | 2780986 - 2781864 | 30382.0 |
| sugar kinase | EC382_RS13260 | Not Available | Positive | 2782037 - 2782933 | 31736.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





