Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiig family protein | EC382_RS13165 | Not Available | Negative | 2760494 - 2761549 | 39350.4 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EC382_RS13170 | Not Available | Negative | 2761702 - 2762535 | 30519.7 |
| formate dehydrogenase-n subunit alpha | EC382_RS13175 | Not Available | Positive | 2762729 - 2765779 | 112446.0 |
| formate dehydrogenase subunit beta | EC382_RS13180 | Not Available | Positive | 2765792 - 2766694 | 33102.1 |
| formate dehydrogenase cytochrome b556 subunit | EC382_RS13185 | Not Available | Positive | 2766691 - 2767326 | 24607.7 |
| formate dehydrogenase accessory protein fdhe | EC382_RS13190 | Not Available | Positive | 2767323 - 2768252 | 34690.5 |
| hypothetical protein | EC382_RS13195 | Not Available | Negative | 2768582 - 2768824 | 9378.09 |
| copg family transcriptional regulator | EC382_RS13200 | Not Available | Negative | 2769041 - 2769259 | 8408.23 |
| hypothetical protein | EC382_RS13205 | Not Available | Negative | 2769953 - 2771767 | 67532.3 |
| fatty acid biosynthesis protein faby | EC382_RS13210 | Not Available | Negative | 2772177 - 2773118 | 35339.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





