Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0149 family protein yeca | EC382_RS13115 | Not Available | Negative | 2751486 - 2752151 | 25008.5 |
| Trna-leu | Not Available | Not Available | Positive | 2752347 - 2752433 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2752446 - 2752519 | Not Available |
| rhamnulose-1-phosphate aldolase | EC382_RS13130 | Not Available | Positive | 2752615 - 2753439 | 30128.2 |
| l-rhamnose mutarotase | EC382_RS13135 | Not Available | Positive | 2753449 - 2753763 | 12293.6 |
| porin | EC382_RS13140 | Not Available | Negative | 2753804 - 2755198 | 51948.3 |
| pts fructose transporter subunit iia | EC382_RS13145 | Not Available | Positive | 2755676 - 2756122 | 16082.4 |
| pts fructose-like transporter subunit iibc | EC382_RS13150 | Not Available | Positive | 2756133 - 2757584 | 51123.5 |
| aminopeptidase | EC382_RS13155 | Not Available | Positive | 2757574 - 2758644 | 38679.7 |
| pts transporter subunit eiia | EC382_RS13160 | Not Available | Positive | 2758644 - 2760392 | 66017.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





