Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | EC382_RS12730 | Not Available | Positive | 2682125 - 2682880 | 28074.8 |
| ubiquinone biosynthesis protein ubij | EC382_RS12735 | Not Available | Positive | 2682894 - 2683499 | 22123.8 |
| ubiquinone biosynthesis regulatory protein kinase ubib | EC382_RS12740 | Not Available | Positive | 2683496 - 2685136 | 63224.3 |
| sec-independent protein translocase subunit tata | EC382_RS12745 | Not Available | Positive | 2685215 - 2685484 | 9664.5 |
| sec-independent protein translocase subunit tatb | EC382_RS12750 | Not Available | Positive | 2685488 - 2686003 | 18421.8 |
| sec-independent protein translocase subunit tatc | EC382_RS12755 | Not Available | Positive | 2686006 - 2686782 | 28877.9 |
| 3'-5' ssdna/rna exonuclease tatd | EC382_RS12760 | Not Available | Positive | 2686824 - 2687606 | 29028.6 |
| transcription/translation regulatory transformer protein rfah | EC382_RS12765 | Not Available | Negative | 2687603 - 2688091 | 18341.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | EC382_RS12770 | Not Available | Positive | 2688258 - 2689751 | 55606.8 |
| nad(p)h-flavin reductase | EC382_RS12775 | Not Available | Positive | 2689797 - 2690498 | 26243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





