Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i adenylate cyclase | EC382_RS12580 | Not Available | Positive | 2651830 - 2654376 | 97622.4 |
| iron donor protein cyay | EC382_RS12585 | Not Available | Negative | 2654416 - 2654736 | 12301.2 |
| lipoprotein | EC382_RS12590 | Not Available | Positive | 2655199 - 2655402 | 7177.59 |
| diaminopimelate epimerase | EC382_RS12595 | Not Available | Positive | 2655439 - 2656263 | 30258.4 |
| duf484 domain-containing protein | EC382_RS12600 | Not Available | Positive | 2656260 - 2656967 | 26730.4 |
| tyrosine recombinase xerc | EC382_RS12605 | Not Available | Positive | 2656964 - 2657860 | 33811.6 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | EC382_RS12610 | Not Available | Positive | 2657860 - 2658576 | 27123.4 |
| dna helicase ii | EC382_RS12615 | Not Available | Positive | 2658660 - 2660822 | 82008.7 |
| s-adenosyl-l-methionine hydroxide adenosyltransferase family protein | EC382_RS12620 | Not Available | Negative | 2660867 - 2661769 | 32725.0 |
| phosphodiester glycosidase family protein | EC382_RS12625 | Not Available | Negative | 2661852 - 2662616 | 28009.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





