Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arom family protein | EC382_RS12425 | Not Available | Negative | 2621212 - 2621889 | 24900.4 |
| protein yaia | EC382_RS12430 | Not Available | Negative | 2622147 - 2622338 | 7281.55 |
| shikimate kinase arol | EC382_RS12435 | Not Available | Negative | 2622388 - 2622912 | 19151.9 |
| yaii/yqxd family protein | EC382_RS12440 | Not Available | Negative | 2623095 - 2623553 | 16970.4 |
| pyrroline-5-carboxylate reductase | EC382_RS12445 | Not Available | Positive | 2623673 - 2624482 | 28162.6 |
| diguanylate cyclase adra | EC382_RS12450 | Not Available | Negative | 2624499 - 2625614 | 41539.9 |
| phosphate starvation-inducible protein psif | EC382_RS12455 | Not Available | Negative | 2625716 - 2626036 | 11687.2 |
| alkaline phosphatase | EC382_RS12460 | Not Available | Negative | 2626155 - 2627570 | 49427.2 |
| anti-adapter protein irap | EC382_RS12465 | Not Available | Negative | 2627671 - 2627931 | 9938.05 |
| d-alanine--d-alanine ligase a | EC382_RS12475 | Not Available | Positive | 2628393 - 2629487 | 39318.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





