Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(18)-2'-o)-methyltransferase trmh | EC382_RS12060 | Not Available | Negative | 2548220 - 2548909 | 25345.6 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | EC382_RS12065 | Not Available | Negative | 2548916 - 2551024 | 79360.1 |
| dna-directed rna polymerase subunit omega | EC382_RS12070 | Not Available | Negative | 2551043 - 2551318 | 10237.2 |
| guanylate kinase | EC382_RS12075 | Not Available | Negative | 2551373 - 2551996 | 23594.1 |
| nad-dependent dna ligase ligb | EC382_RS12080 | Not Available | Positive | 2552254 - 2553936 | 63147.8 |
| trimeric intracellular cation channel family protein | EC382_RS12085 | Not Available | Negative | 2553933 - 2554550 | 22049.8 |
| dna damage-inducible protein d | EC382_RS12090 | Not Available | Negative | 2554842 - 2555666 | 31262.9 |
| hypothetical protein | EC382_RS12095 | Not Available | Positive | 2556379 - 2556753 | 14133.8 |
| antitermination protein | EC382_RS12100 | Not Available | Negative | 2557438 - 2557830 | 14718.9 |
| restriction endonuclease | EC382_RS12105 | Not Available | Negative | 2559212 - 2560273 | 40554.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





