Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iib | EC382_RS12010 | Not Available | Positive | 2536333 - 2536647 | 11244.9 |
| pts fructose transporter subunit iic | EC382_RS12015 | Not Available | Positive | 2536672 - 2537763 | 38783.1 |
| class ii fructose-bisphosphate aldolase family protein | EC382_RS12020 | Not Available | Positive | 2537775 - 2538626 | 30121.5 |
| ketose-bisphosphate aldolase | EC382_RS12025 | Not Available | Positive | 2538707 - 2539567 | 30814.0 |
| rok family protein | EC382_RS12030 | Not Available | Positive | 2539615 - 2540547 | 32958.6 |
| d-lyxose/d-mannose family sugar isomerase | EC382_RS12035 | Not Available | Positive | 2540528 - 2541208 | 26154.1 |
| asma family protein | EC382_RS12040 | Not Available | Negative | 2541252 - 2542961 | 62213.7 |
| xanthine/proton symporter xanp | EC382_RS12045 | Not Available | Negative | 2543082 - 2544473 | 48871.2 |
| sodium/glutamate symporter | EC382_RS12050 | Not Available | Positive | 2544752 - 2545957 | 42445.9 |
| atp-dependent dna helicase recg | EC382_RS12055 | Not Available | Negative | 2546133 - 2548214 | 76535.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





