Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EC382_RS11960 | Not Available | Positive | 2524635 - 2525531 | 32836.9 |
| ribose-5-phosphate isomerase rpia | EC382_RS11965 | Not Available | Positive | 2525587 - 2526246 | 22861.8 |
| d-3-phosphoglycerate dehydrogenase | EC382_RS11970 | Not Available | Positive | 2526502 - 2527734 | 44178.4 |
| response regulator | EC382_RS11975 | Not Available | Negative | 2527880 - 2528120 | 8874.8 |
| tyrosine-type recombinase/integrase | EC382_RS11980 | Not Available | Negative | 2528396 - 2529577 | 45395.2 |
| Trna-sec(p) | Not Available | Not Available | Positive | 2529877 - 2529967 | Not Available |
| glycoside-pentoside-hexuronide family transporter | EC382_RS11990 | Not Available | Positive | 2530260 - 2531642 | 50937.4 |
| alpha-xylosidase | EC382_RS11995 | Not Available | Positive | 2531652 - 2533970 | 88023.9 |
| prd domain-containing protein | EC382_RS12000 | Not Available | Positive | 2534265 - 2535818 | 58928.1 |
| pts transporter subunit eiia | EC382_RS12005 | Not Available | Positive | 2535845 - 2536315 | 17381.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





