Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase 2 | EC382_RS11710 | Not Available | Positive | 2475979 - 2477025 | 36852.7 |
| duf1202 family protein | EC382_RS11715 | Not Available | Positive | 2477142 - 2478149 | 38491.5 |
| radical sam family heme chaperone hemw | EC382_RS11720 | Not Available | Negative | 2478305 - 2479441 | 42488.4 |
| xtp/ditp diphosphatase | EC382_RS11725 | Not Available | Negative | 2479434 - 2480027 | 20978.9 |
| yggu family protein | EC382_RS11730 | Not Available | Negative | 2480035 - 2480325 | 10429.8 |
| osmotic shock tolerance protein yggt | EC382_RS11735 | Not Available | Negative | 2480322 - 2480888 | 21168.5 |
| pyridoxal phosphate homeostasis protein | EC382_RS11740 | Not Available | Negative | 2480906 - 2481610 | 25788.9 |
| type iv pilus twitching motility protein pilt | EC382_RS11745 | Not Available | Positive | 2481628 - 2482608 | 35991.4 |
| holliday junction resolvase ruvx | EC382_RS11750 | Not Available | Negative | 2482792 - 2483208 | 15187.2 |
| yqge/algh family protein | EC382_RS11755 | Not Available | Negative | 2483208 - 2483843 | 23333.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





