Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 2466265 - 2466340 | Not Available |
| duf554 domain-containing protein | EC382_RS11665 | Not Available | Negative | 2466446 - 2467153 | 24671.6 |
| ornithine decarboxylase | EC382_RS11670 | Not Available | Positive | 2467552 - 2469687 | 79510.6 |
| nucleoside permease | EC382_RS11675 | Not Available | Negative | 2469737 - 2470993 | 46392.0 |
| membrane-bound lytic murein transglycosylase mltc | EC382_RS11680 | Not Available | Negative | 2471195 - 2472274 | 40114.8 |
| oxidative damage protection protein | EC382_RS11685 | Not Available | Negative | 2472339 - 2472614 | 10953.2 |
| a/g-specific adenine glycosylase | EC382_RS11690 | Not Available | Negative | 2472642 - 2473694 | 39197.3 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EC382_RS11695 | Not Available | Positive | 2473855 - 2474574 | 27308.9 |
| duf469 domain-containing protein | EC382_RS11700 | Not Available | Positive | 2474574 - 2474900 | 12881.2 |
| duf2884 domain-containing protein | EC382_RS11705 | Not Available | Positive | 2475084 - 2475803 | 26430.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





