Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | EC382_RS11410 | Not Available | Negative | 2412938 - 2414188 | 45772.4 |
| 23s rrna pseudouridine(2457) synthase rlue | EC382_RS11415 | Not Available | Positive | 2414360 - 2415013 | 24881.8 |
| phosphatase nudj | EC382_RS11420 | Not Available | Positive | 2415023 - 2415484 | 17433.8 |
| trna 2-thiouridine(34) synthase mnma | EC382_RS11425 | Not Available | Positive | 2415538 - 2416644 | 41003.8 |
| high frequency lysogenization protein hfld | EC382_RS11430 | Not Available | Positive | 2416680 - 2417321 | 22949.0 |
| adenylosuccinate lyase | EC382_RS11435 | Not Available | Positive | 2417325 - 2418695 | 51572.7 |
| two-component system response regulator phop | EC382_RS11440 | Not Available | Positive | 2418863 - 2419534 | 25536.7 |
| two-component system sensor histidine kinase phoq | EC382_RS11445 | Not Available | Positive | 2419534 - 2420994 | 55332.9 |
| cupin domain-containing protein | EC382_RS11450 | Not Available | Positive | 2421070 - 2422191 | 42567.2 |
| peptidase t | EC382_RS11455 | Not Available | Negative | 2422240 - 2423466 | 44912.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





