Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | EC382_RS11360 | Not Available | Negative | 2405677 - 2407200 | 56816.1 |
| hypothetical protein | EC382_RS11365 | Not Available | Negative | 2407532 - 2407780 | 9701.79 |
| biofilm/acid-resistance regulator arir | EC382_RS11370 | Not Available | Negative | 2407893 - 2408159 | 9710.59 |
| two-component-system connector protein ymga | EC382_RS11375 | Not Available | Negative | 2408188 - 2408460 | 10259.4 |
| two-component-system connector protein ycgz | EC382_RS11380 | Not Available | Negative | 2408503 - 2408739 | 8720.46 |
| blue light-responsive regulator bluf | EC382_RS11385 | Not Available | Positive | 2409054 - 2410265 | 45288.5 |
| merr family transcriptional regulator | EC382_RS11390 | Not Available | Positive | 2410460 - 2411191 | 28236.1 |
| duf1398 domain-containing protein | EC382_RS11395 | Not Available | Positive | 2411412 - 2411816 | 15770.0 |
| hypothetical protein | EC382_RS11400 | Not Available | Positive | 2411869 - 2411979 | 4207.46 |
| anti-adapter protein iram | EC382_RS11405 | Not Available | Positive | 2412512 - 2412835 | 12122.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





